Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCCAGAGAGAGGAGATCTTCCAGG
..((((((((((((((((((..&))))))))..)))))).....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032424
GeneSymbolMSANTD4
Binding site319,345
Score1.0
Seed1
Au0.441
Energy-25.4
Binding len26
Me-4.957
Phylopstem0.24487088400000004
Phylopflank0.11573030374999997
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
Position5UTR
2D Structure