Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGATGTCCCTCCAAGAGAACCCAGGGACAGGCCAGTGG
((((((((..(((((((((...&.)))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032425
GeneSymbolHHIPL1
Binding site1603,1643
Score0.846
Seed1
Au0.397
Energy-28.7
Binding len21
Me-6.236
Phylopstem4.908741666666667
Phylopflank4.326791845000001
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure