Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCATGTGTGTGTTGGGG
.(((((((((((((((((((..&)))))))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032435
GeneSymbolMAP3K21
Binding site5417,5438
Score0.923
Seed1
Au0.603
Energy-21.1
Binding len21
Me-3.793
Phylopstem-0.16029559
Phylopflank-0.29645558425
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure