Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCAGCTGGCGGACGGAGGGGAGCCTCAGAGTGT
(((((((((((((((((((((.&)))))..........))))))))))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032470
GeneSymbolTNXB
Binding site1562,1598
Score0.923
Seed1
Au0.309
Energy-27.5
Binding len36
Me-3.938
Phylopstem1.088210982857143
Phylopflank1.09357211
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure