Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCACAGAGGACCAGGTGG
((((((.((((((.((((....&)))).)))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032495
GeneSymbolHOPX
Binding site203,222
Score0.846
Seed0
Au0.382
Energy-20.7
Binding len19
Me-6.338
Phylopstem0.3206181833333333
Phylopflank0.16832834200000002
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure