Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGGAAATTGTTTCCATTTGGTACATTTTGTGCCAGT
..((((((((.((((((.....&.)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032498
GeneSymbolRHOXF2
Binding site2223,2262
Score0.923
Seed1
Au0.632
Energy-18.3
Binding len17
Me-7.782
Phylopstem-0.43911887499999996
Phylopflank-0.23883802487499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure