Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCGCGATGCCAGT
..(((((((....(((((((..&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032505
GeneSymbolKBTBD8
Binding site1318,1335
Score0.846
Seed1
Au0.559
Energy-15.0
Binding len17
Me-13.66
Phylopstem4.327033
Phylopflank5.41786464
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure