Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGTGTTGTAAACCAGGTC
((((((..((((((((((....&))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032513
GeneSymbolSLC30A2
Binding site1288,1307
Score0.846
Seed0
Au0.397
Energy-17.1
Binding len19
Me-7.795
Phylopstem0.02650032
Phylopflank-0.149378224125
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure