Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGG
(((((((((((((((((((((.&)))))))))))).................)))))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032514
GeneSymbolMAP1LC3A
Binding site567,617
Score0.846
Seed1
Au0.353
Energy-26.0
Binding len50
Me-3.938
Phylopstem0.5982206253061225
Phylopflank0.6189260394999998
Longest consecutive pairings12
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure