Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATCCAGCATTCCAGGCAGCCACTACCAGCGGGCTGGAGCTGGTGT
((((((((((..(((((((((.&.)))))..))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032526
GeneSymbolNT5C1A
Binding site6295,6343
Score0.846
Seed1
Au0.471
Energy-26.6
Binding len25
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure