Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGGGAGGCCCTCTGAGGGGCTGGG
..((((((((((((((((((((&))))))))))).........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032538
GeneSymbolTTBK1
Binding site1400,1430
Score0.846
Seed1
Au0.265
Energy-28.4
Binding len30
Me-4.957
Phylopstem1.8964116546206895
Phylopflank3.5268078118999986
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure