Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CAGAAGAAACAGGATCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032546
GeneSymbolTRIM54
Binding site810,857
Score0.846
Seed1
Au0.471
Energy-28.9
Binding len24
Me-10.109
Phylopstem0.1633707272727273
Phylopflank1.7930175174999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure