Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCATTGTGTTAGCCGGGA
.((((((((((((((.((((((&))))))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032554
GeneSymbolHCAR1
Binding site4106,4129
Score1.0
Seed1
Au0.529
Energy-20.4
Binding len23
Me-4.026
Phylopstem1.2179979375
Phylopflank1.6848458187500004
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure