Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGA
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032554
GeneSymbolHCAR1
Binding site3571,3604
Score0.923
Seed1
Au0.456
Energy-28.7
Binding len24
Me-10.109
Phylopstem-1.2089585272727275
Phylopflank0.8776711825
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure