Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTACAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032554
GeneSymbolHCAR1
Binding site3951,3974
Score0.923
Seed1
Au0.441
Energy-26.9
Binding len23
Me-10.109
Phylopstem0.32755763636363633
Phylopflank1.5681338375
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure