Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATATGTATGCCAATTTGGTG
(((((((((((.(((((.(...&).)))))))))))))....))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032588
GeneSymbolTRIM63
Binding site1498,1521
Score0.846
Seed1
Au0.75
Energy-16.9
Binding len23
Me-7.284
Phylopstem6.490167793333334
Phylopflank5.018071698750001
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure