Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGGCAGCCCTGCCAGGTG
((((((((.....(((((....&))))).......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032622
GeneSymbolLNX1
Binding site987,1008
Score0.923
Seed1
Au0.397
Energy-18.4
Binding len21
Me-13.697
Phylopstem1.6733156249999999
Phylopflank2.3594689412500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure