Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGAGACCAGCAGTGTCTCAATTATTACGTTGCTGCCAGGA
.(((((((..((((((((....&.)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032649
GeneSymbolCNDP1
Binding site3696,3741
Score1.0
Seed1
Au0.529
Energy-20.0
Binding len18
Me-6.092
Phylopstem-0.09169475000000002
Phylopflank-0.08251435749999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure