Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCACTGTCCAGGA
.(((((...(((.(((((((..&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032663
GeneSymbolUSP30
Binding site1692,1709
Score0.846
Seed0
Au0.515
Energy-17.6
Binding len17
Me-9.996
Phylopstem0.23558342857142858
Phylopflank0.6250672449999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure