Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCCATCCACGTTGGCCAGGC
.((((((...((((((.(((..&.))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032704
GeneSymbolTUBA1C
Binding site112,135
Score0.808
Seed1
Au0.412
Energy-18.4
Binding len18
Me-8.406
Phylopstem4.059510016666667
Phylopflank3.204955563749999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure