Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGAATGATTGTCTCTACCTCTTTATGCCAGA
..((((((((....(((((...&.))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032717
GeneSymbolGPAT3
Binding site1925,1961
Score0.923
Seed1
Au0.559
Energy-17.4
Binding len20
Me-13.275
Phylopstem0.9082913750000001
Phylopflank0.46957607249999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure