Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AACTGTGTAGCATCTGCATTGCCCAGTCTTTCATGTGTGCCAAGGC
.(((((((((((((((((((..&.))))))))..............))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032727
GeneSymbolINA
Binding site2940,2986
Score0.923
Seed1
Au0.5
Energy-22.3
Binding len36
Me-3.793
Phylopstem0.23413719117647058
Phylopflank0.1567807200000001
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure