Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAAAGGAGTCCATTATCGCTGGGCATTTTTCATGGCCAGTGG
((((((((((((((((((....&)))))))))))...........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032730
GeneSymbolRTN4IP1
Binding site1471,1517
Score0.846
Seed1
Au0.515
Energy-23.4
Binding len46
Me-3.938
Phylopstem4.096413284444444
Phylopflank3.584984647499999
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end4
PositionCDS
2D Structure