Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCATTTGCCAGGA
.(((((((...((((.(((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032776
GeneSymbolJMJD1C
Binding site7215,7230
Score0.923
Seed1
Au0.559
Energy-16.4
Binding len15
Me-9.15
Phylopstem2.6116372857142856
Phylopflank2.5194420646249993
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure