Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGC
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032776
GeneSymbolJMJD1C
Binding site4264,4274
Score1.0
Seed1
Au0.603
Energy-15.9
Binding len10
Me-11.418
Phylopstem1.9691416666666666
Phylopflank1.7326185349999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure