Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCTGGAAAAGAGCAGTGA
((((.((((.(((((((((((.&))))))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032776
GeneSymbolJMJD1C
Binding site5812,5833
Score0.846
Seed0
Au0.529
Energy-24.2
Binding len21
Me-9.299
Phylopstem4.511289363636364
Phylopflank5.01948712375
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure