Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGAGTGATGTAGGCACAGA
..(((((((((((((((((...&)))))))))).)).....)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032776
GeneSymbolJMJD1C
Binding site6280,6305
Score0.846
Seed1
Au0.515
Energy-21.4
Binding len25
Me-4.957
Phylopstem4.459117125000001
Phylopflank3.83582672
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure