Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTACAGAAGGGGAAAGGCTGCAGA
.....(((((((((((((...&.))))).)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_032779
GeneSymbolCCDC142
Binding site3944,3969
Score0.865
Seed0
Au0.471
Energy-25.5
Binding len16
Me-13.666
Phylopstem-0.3618174285714285
Phylopflank0.27668116625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure