Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTAACTTCTCACTTGGAACAGACTGCGTAAGAGCCAGGTG
(((((((.....((((((.(((&.)))))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032795
GeneSymbolRPUSD4
Binding site1252,1296
Score0.846
Seed1
Au0.529
Energy-17.3
Binding len22
Me-14.722
Phylopstem-0.6125024285714286
Phylopflank-0.005278585000000044
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure