Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGTGGACGAGGGCCACACGGTGCAGTTTGTGTGCCGGGC
.((((((((((((((((.....&.))))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032808
GeneSymbolLINGO1
Binding site1898,1940
Score0.846
Seed1
Au0.294
Energy-22.3
Binding len20
Me-3.793
Phylopstem4.292252388888888
Phylopflank4.8601547325
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure