Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGTATTCCCCCAGCACTTGCTGAGAGCATGCCGTATGCCAGGC
.((((((((((.((((......&.))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032813
GeneSymbolTMTC4
Binding site105,152
Score0.923
Seed1
Au0.412
Energy-21.1
Binding len19
Me-7.14
Phylopstem-0.45741324
Phylopflank-0.25721437999999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure