Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCACCTCTGGAGGGGCTGGG
..(((((((((((.(((((((.&))))))).....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032813
GeneSymbolTMTC4
Binding site1138,1162
Score0.846
Seed1
Au0.397
Energy-22.2
Binding len24
Me-5.814
Phylopstem0.842693181818182
Phylopflank1.19308393
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure