Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTAGCCACTTCTGCAAC
((((((..(.((((((((((.&)))))))))).)..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346850
GeneSymbolC1S
Binding site536,557
Score1.0
Seed0
Au0.574
Energy-20.6
Binding len21
Me-9.037
Phylopstem2.33940944
Phylopflank3.6609761987499994
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
Position5UTR
2D Structure