Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGTGGACGCCAGG
..((((((((...(((((((((&))))))))).))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032818
GeneSymbolARHGEF39
Binding site661,681
Score0.923
Seed1
Au0.338
Energy-25.4
Binding len20
Me-12.418
Phylopstem0.11809799999999998
Phylopflank-0.03011560999999999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure