Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGAGAGACTGTCAAGAAAAAGGAGATGGAGCCGGG
..(((((((((((((((((((.&))))))...................))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032833
GeneSymbolPPP1R15B
Binding site377,417
Score0.923
Seed1
Au0.412
Energy-25.7
Binding len40
Me-4.957
Phylopstem0.38024026307692316
Phylopflank0.13263659049999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure