Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTTAACCACAGTGACATTGTATGCCT
....((((((((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032839
GeneSymbolSLC49A4
Binding site1250,1277
Score1.0
Seed0
Au0.559
Energy-19.5
Binding len14
Me-9.547
Phylopstem4.6051037500000005
Phylopflank4.251740669999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure