Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGTTCCAGAAGGAATTACTTGTGG
(((.((.(((((((((((((((&))))))))).....))))))....)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032839
GeneSymbolSLC49A4
Binding site1346,1377
Score0.923
Seed0
Au0.647
Energy-21.8
Binding len31
Me-8.513
Phylopstem5.480051695
Phylopflank4.632052245000001
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure