Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGTGTCTGCCCCTGAGGAGGCCTCCCCAAAGCCAGTC
.(((((((((((((.(((((((&.)))))))..))).))).........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032855
GeneSymbolHSH2D
Binding site980,1023
Score0.923
Seed1
Au0.397
Energy-24.6
Binding len34
Me-4.529
Phylopstem-0.19239537391304348
Phylopflank-0.07877930674999994
Longest consecutive pairings7
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure