Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACAGGAGGAGTAGGAGCCGGTC
.((((((((((((((..((((.&))))....)))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032864
GeneSymbolPRPF38A
Binding site837,861
Score0.904
Seed1
Au0.397
Energy-25.5
Binding len24
Me-4.026
Phylopstem3.9651026200000006
Phylopflank4.148765662499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure