Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAGAGTATTGAGGTGCTAGGTA
(((((((((.(((((.......&.)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032869
GeneSymbolNUDCD1
Binding site3199,3222
Score0.923
Seed1
Au0.544
Energy-17.0
Binding len18
Me-5.413
Phylopstem1.1924336666666666
Phylopflank3.0439987975
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure