Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCATTTTCCCAGGCTCTCTTCACCATCACTGCATTGGTAGCTAGGA
.((((((...((((((((....&.))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032873
GeneSymbolUBASH3B
Binding site5215,5266
Score1.0
Seed1
Au0.485
Energy-20.8
Binding len19
Me-8.406
Phylopstem0.10529125000000003
Phylopflank0.506840961
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure