Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGGGGAGGGCA
.....((.((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032878
GeneSymbolALKBH6
Binding site378,395
Score0.923
Seed0
Au0.397
Energy-23.6
Binding len17
Me-15.979
Phylopstem2.594878692857143
Phylopflank1.2400916950000003
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure