Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCGGGG
.((((((((((...........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032888
GeneSymbolCOL27A1
Binding site2773,2784
Score1.0
Seed1
Au0.382
Energy-19.4
Binding len11
Me-10.255
Phylopstem7.688035999999999
Phylopflank4.005456190375002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure