Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCCAGGGCCTGCAGGGGCTGCCAGGG
.(((((((..(..(((((....&.)))))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032888
GeneSymbolCOL27A1
Binding site4666,4695
Score0.846
Seed1
Au0.191
Energy-22.7
Binding len19
Me-10.728
Phylopstem1.1157450928571429
Phylopflank3.2272325943749998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure