Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGTAGAAGTGGGTGG
((((.(((.((..(((((((((&))))))))).)).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032888
GeneSymbolCOL27A1
Binding site6132,6154
Score0.923
Seed0
Au0.382
Energy-25.9
Binding len22
Me-13.749
Phylopstem0.956362211111111
Phylopflank0.4254066150000001
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure