Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTTACCAGAGAGGCTTTGAATGGAAGCAGGCTGAGAGTAGCCAA
...((((((((((((((..(((&)))..))))))))).........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032969
GeneSymbolPCDH11X
Binding site6606,6651
Score0.846
Seed0
Au0.5
Energy-20.2
Binding len45
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end6
Position3UTR
2D Structure