Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_032971
GeneSymbolPCDH11Y
Binding site4330,4347
Score0.846
Seed0
Au0.338
Energy-22.4
Binding len17
Me-9.547
Phylopstem0.03385687500000001
Phylopflank-0.23071933749999995
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure