Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCGGAAGTTGCAGTGAGCCGA
...((((((((((((((((...&)))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032972
GeneSymbolPCDH11Y
Binding site5070,5100
Score0.846
Seed0
Au0.424
Energy-22.5
Binding len30
Me-6.515
Phylopstem0.05837300000000002
Phylopflank0.17864016249999998
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
Position3UTR
2D Structure