Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_032972
GeneSymbolPCDH11Y
Binding site5042,5059
Score0.974
Seed0
Au0.412
Energy-22.4
Binding len17
Me-9.547
Phylopstem0.31825356250000003
Phylopflank0.08901191250000001
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure