Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCGGCTTCGCGCTGCCCGAGCTGGAGCACAACCTGCAGCTGCT
..((((((((((((((.....&.)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346859
GeneSymbolTFIP11
Binding site1150,1197
Score0.846
Seed1
Au0.368
Energy-25.3
Binding len17
Me-4.957
Phylopstem5.664209866666666
Phylopflank4.23761389375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure